Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001960Tachykinin precursor 3b. (114 aa)    
Predicted Functional Partners:
ENSSGRP00000031607
annotation not available
    
 0.963
ENSSGRP00000024132
Neuromedin-K receptor-like.
    
 0.942
ENSSGRP00000031788
Neuromedin-K receptor-like.
    
 0.942
LOC107556806
Neuromedin-K receptor-like.
    
 0.942
LOC107552719
Neuromedin-K receptor-like.
    
 0.942
ENSSGRP00000063317
Tachykinin precursor 3b.
     
  0.892
LOC107563044
Neuromedin-K receptor-like.
    
 0.885
LOC107601831
Neuromedin-K receptor-like.
    
 0.885
ENSSGRP00000001718
Tachykinin receptor 1a.
    
 0.852
ENSSGRP00000005798
Substance-P receptor-like.
    
 0.852
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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