Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001966Apolipoprotein F. (301 aa)    
Predicted Functional Partners:
ENSSGRP00000051806
annotation not available
     
 0.891
apob
Apolipoprotein B-100.
   
 
 0.635
LOC107564590
Apolipoprotein B-100-like.
   
 
 0.592
ENSSGRP00000049681
Apolipoprotein B-100-like.
   
 
 0.592
LOC107549128
Apolipoprotein B-100-like.
   
 
 0.592
ENSSGRP00000059302
Apolipoprotein B-100-like.
   
 
 0.592
ENSSGRP00000078331
Apolipoprotein B-100-like isoform X1.
   
 
 0.592
ENSSGRP00000076565
Ufm1-specific protease 2-like.
      
 0.566
ENSSGRP00000011127
annotation not available
   
  
 0.556
ENSSGRP00000033242
Craniofacial development protein 1-like isoform X1.
      
 0.555
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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