Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107586807Apolipoprotein D and lipocalin family protein. (186 aa)    
Predicted Functional Partners:
SCG5
Neuroendocrine protein 7B2-like.
    
   0.629
SCG5-2
Neuroendocrine protein 7B2-like.
    
   0.629
LOC107582169
Apolipoprotein A-I-like isoform X1.
    
 
 0.593
LOC107582086
Apolipoprotein A-I-like.
    
 
 0.593
ENSSGRP00000015803
Apolipoprotein A-I-like.
    
 
 0.593
LOC107596479
Apolipoprotein A-I-like.
    
 
 0.593
ENSSGRP00000079108
Apolipoprotein Eb-like.
    
 
 0.593
LOC107595112
Apolipoprotein A-I-like.
    
 
 0.593
LOC107595122
Apolipoprotein A-I-like.
    
 
 0.593
LOC107559732
Transthyretin-like.
  
 
 0.581
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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