Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001971Zinc finger protein 385C. (471 aa)    
Predicted Functional Partners:
LOC107599945
Cellular tumor antigen p53.
    
  0.640
LOC107592291
Cellular tumor antigen p53-like.
    
  0.640
ENSSGRP00000006490
annotation not available
    
 
 0.574
LOC107553960
Homeobox protein HMX2-like.
    
 
 0.574
LOC107553541
INO80 complex subunit B-like.
   
 0.535
ENSSGRP00000007647
annotation not available
    
 0.509
LOC107558645
Iroquois-class homeodomain protein irx-1-like isoform X1.
    
 0.509
LOC107554507
Iroquois-class homeodomain protein irx-1-like.
    
 0.509
Gart
Trifunctional purine biosynthetic protein adenosine-3.
     
  0.490
LOC107597795
Histone H2A deubiquitinase MYSM1-like.
    
  0.465
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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