Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001972Uncharacterized protein LOC107592132 isoform X1. (372 aa)    
Predicted Functional Partners:
LOC107583474
Four and a half LIM domains protein 2-like isoform X1.
      
 0.813
ENSSGRP00000071001
Four and a half LIM domains protein 2-like.
      
 0.813
LOC107571110
Superkiller viralicidic activity 2-like 2 isoform X1.
   
 0.715
ENSSGRP00000052492
Mtr4 exosome RNA helicase.
   
 0.715
LOC107564610
ATP-binding cassette, subfamily G (WHITE), member 2.
      
 0.684
ENSSGRP00000037344
annotation not available
      
 0.684
ENSSGRP00000012034
annotation not available
    
 
 0.669
ENSSGRP00000032214
Nuclear receptor subfamily 0 group B member 2-like.
    
 
 0.669
LOC107557469
Apolipoprotein D and lipocalin family protein.
      
 0.657
ENSSGRP00000095733
Nuclear receptor subfamily 0 group B member 2-like.
    
 
 0.602
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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