STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001972Uncharacterized protein LOC107592132 isoform X1. (372 aa)    
Predicted Functional Partners:
LOC107571110
Superkiller viralicidic activity 2-like 2 isoform X1.
   
 
 0.657
ENSSGRP00000052492
Mtr4 exosome RNA helicase.
   
 
 0.657
ENSSGRP00000023512
Helicase SKI2W-like.
   
 
 0.510
ENSSGRP00000026523
Terminal nucleotidyltransferase 4A.
   
 
 0.509
TENT4A
Terminal nucleotidyltransferase 4A.
   
 
 0.509
ENSSGRP00000066387
Non-canonical poly(A) RNA polymerase PAPD5-like.
   
 
 0.509
Papd5
Non-canonical poly(A) RNA polymerase PAPD5/7.
   
 
 0.509
ENSSGRP00000038356
O-acyltransferase like.
      
 0.445
ENSSGRP00000008898
Uncharacterized protein LOC107578959.
  
  
  0.435
LOC107584532
Uncharacterized protein LOC107584532.
  
   
 0.433
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.