Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001974Bone morphogenetic protein 7-like. (392 aa)    
Predicted Functional Partners:
LOC107581671
Noggin-3-like.
    
 0.934
LOC107602619
Activin receptor type-1-like.
    
 0.934
LOC107588871
Activin receptor type-1-like isoform X1.
    
 0.934
LOC107563048
Bone morphogenetic protein receptor type-1A-like isoform X1.
    
 0.933
ENSSGRP00000100338
Bone morphogenetic protein receptor type-1A-like.
    
 0.933
ENSSGRP00000041345
Chordin-like.
    
 0.925
chrd
Chordin.
    
 0.925
ENSSGRP00000028470
Activin A receptor type 2Ba.
    
 0.916
acvr2b
Activin receptor type-2B.
    
 0.916
LOC107555441
Bone morphogenetic protein receptor type-2-like isoform X1.
    
 0.913
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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