Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gabpb2GA-binding protein transcription factor, beta. (407 aa)    
Predicted Functional Partners:
LOC107595806
GA-binding protein alpha chain-like isoform X1.
    
 0.941
LOC107597487
GA-binding protein transcription factor, alpha.
    
 0.941
LOC107549984
Tumor protein D54-like isoform X1.
    
  0.634
tpd52l2
Tumor protein D54 isoform X1.
    
  0.634
ENSSGRP00000058197
Tpd52 like 2a.
    
  0.634
ENSSGRP00000066367
Tpd52 like 2b.
    
  0.634
LOC107564078
Tudor domain-containing protein 1/4/6/7.
    
  0.581
LOC107549729
Tudor domain-containing protein 1/4/6/7.
    
  0.581
LOC107597872
Tudor domain-containing protein 1/4/6/7.
    
  0.581
LOC107557954
Tudor domain-containing protein 1/4/6/7.
    
  0.581
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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