Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001992Transmembrane and coiled-coil domains protein 1-like. (203 aa)    
Predicted Functional Partners:
tmcc3
Transmembrane and coiled-coil domains protein 3.
   
 
 0.726
ENSSGRP00000109988
Transmembrane and coiled-coil domains protein 3-like.
   
 
 0.726
ENSSGRP00000049457
annotation not available
      
 0.541
ENSSGRP00000049817
HAUS augmin-like complex subunit 7.
      
 0.541
Rbbp5
Retinoblastoma-binding protein 5.
      
 0.504
LOC107572354
Dual serine/threonine and tyrosine protein kinase-like.
      
 0.501
LOC107569761
Dual serine/threonine and tyrosine protein kinase-like.
      
 0.501
LOC107569661
60 kDa heat shock protein, mitochondrial.
    
   0.415
LOC107595848
60 kDa heat shock protein, mitochondrial-like.
    
   0.415
VSTM2B
V-set and transmembrane domain-containing protein 2B.
      
 0.407
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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