STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107592129Uncharacterized protein LOC107592129. (391 aa)    
Predicted Functional Partners:
ENSSGRP00000020044
annotation not available
  
     0.532
ENSSGRP00000017288
annotation not available
  
     0.527
ENSSGRP00000033170
annotation not available
  
     0.522
LOC107575283
Carboxypeptidase A1-like.
      
 0.522
ENSSGRP00000009815
Actinodin3.
  
   
 0.519
ENSSGRP00000060875
annotation not available
  
     0.518
ENSSGRP00000066691
Extensin-like.
  
   
 0.518
ENSSGRP00000003283
Ras-associated and pleckstrin homology domains-containing protein 1-like.
  
   
 0.513
ENSSGRP00000096384
Actinodin3.
  
   
 0.489
ENSSGRP00000035105
annotation not available
  
     0.470
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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