Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC107557534Single-strand selective monofunctional uracil DNA glycosylase-like. (286 aa)    
Predicted Functional Partners:
LOC107565014
Probable inactive tRNA-specific adenosine deaminase-like protein 3.
   
 0.911
LOC107602133
Probable inactive tRNA-specific adenosine deaminase-like protein 3.
   
 0.911
ENSSGRP00000006866
annotation not available
  
 
 0.829
ENSSGRP00000050275
Thymidylate synthetase.
  
 
 0.829
ENSSGRP00000001839
Serine/threonine-protein kinase SMG1-like isoform X1.
    
   0.824
ENSSGRP00000002591
Serine/threonine-protein kinase SMG1-like.
    
   0.824
LOC107579619
DNA-(apurinic or apyrimidinic site) lyase-like.
   
 
 0.804
LOC107583973
DNA-(apurinic or apyrimidinic site) lyase isoform X1.
   
 
 0.804
LOC107590866
G/T mismatch-specific thymine DNA glycosylase-like.
   
  
 0.803
ENSSGRP00000011824
Uracil DNA glycosylase b.
  
 
 0.782
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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