STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107557534Single-strand selective monofunctional uracil DNA glycosylase-like. (286 aa)    
Predicted Functional Partners:
LOC107565014
Probable inactive tRNA-specific adenosine deaminase-like protein 3.
   
 0.964
LOC107602133
Probable inactive tRNA-specific adenosine deaminase-like protein 3.
   
 0.964
LOC107551321
Single-strand selective monofunctional uracil DNA glycosylase-like.
  
  
 
0.900
ENSSGRP00000006866
annotation not available
  
 
 0.895
ENSSGRP00000050275
Thymidylate synthetase.
  
 
 0.895
LOC107585096
N-acetylglutamate synthase, mitochondrial-like.
    
  0.881
ENSSGRP00000034364
annotation not available
   
 0.848
uprt
Uracil phosphoribosyltransferase homolog.
   
 0.848
ENSSGRP00000004641
5'-nucleotidase-like isoform X1.
    
 0.840
ENSSGRP00000045402
5'-nucleotidase-like.
    
 0.840
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.