STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107564539Uncharacterized protein LOC107564539 isoform X1. (528 aa)    
Predicted Functional Partners:
ENSSGRP00000030777
Uncharacterized protein LOC107602534.
    
 0.680
LOC107573567
RanBP-type and C3HC4-type zinc finger-containing protein 1-like.
    
  0.666
ENSSGRP00000048275
RanBP-type and C3HC4-type zinc finger-containing protein 1-like.
    
  0.666
LOC107556071
RanBP-type and C3HC4-type zinc finger-containing protein 1-like.
    
  0.666
LOC107590993
RanBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1.
    
  0.666
LOC107574178
Ubiquitin carboxyl-terminal hydrolase CYLD-like.
     
  0.650
LOC107551493
Ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1.
     
  0.650
ENSSGRP00000079686
Ubiquitin carboxyl-terminal hydrolase CYLD-like.
     
  0.650
rnf31
E3 ubiquitin-protein ligase RNF31.
     
  0.650
LOC107556989
Ubiquitin carboxyl-terminal hydrolase CYLD-like.
     
  0.650
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.