Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000002145MFS transporter, VNT family, synaptic vesicle glycoprotein 2. (707 aa)    
Predicted Functional Partners:
LOC107595246
Laminin subunit beta-1-like.
     
 0.923
ENSSGRP00000096634
Laminin subunit beta-4-like.
     
  0.912
LAMC2
Laminin subunit gamma-2-like.
     
 0.881
ENSSGRP00000068749
Laminin, gamma 2.
     
 0.881
ENSSGRP00000012484
Laminin subunit beta-1-like.
     
 0.870
ENSSGRP00000104212
Laminin, beta 2 (laminin S).
     
 0.870
Lamb3
Laminin subunit beta-3 isoform X1.
     
 0.861
ENSSGRP00000026187
annotation not available
     
 0.861
ENSSGRP00000032089
Laminin subunit beta-1-like.
     
 0.861
LOC107568836
Laminin subunit beta-2-like isoform X1.
     
 0.861
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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