Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000002154Zgc:171501. (478 aa)    
Predicted Functional Partners:
ENSSGRP00000006866
annotation not available
    
  0.426
ENSSGRP00000050275
Thymidylate synthetase.
    
  0.426
ENSSGRP00000021463
Protein FAM234B-like.
      
 0.411
ENSSGRP00000052373
SAS-6 centriolar assembly protein.
      
 0.409
sass6
Spindle assembly abnormal protein 6 homolog.
      
 0.409
TK1
Thymidine kinase, cytosolic-like isoform X1.
     
  0.406
tk1
Thymidine kinase, cytosolic.
     
  0.406
LOC107548994
Occludin-like.
      
 0.405
LOC107591828
Zinc finger protein 335-like.
      
 0.405
ENSSGRP00000100585
Occludin a.
      
 0.405
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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