STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107564540Thymidine kinase 2, mitochondrial-like. (227 aa)    
Predicted Functional Partners:
ndufb5
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial.
   
 0.946
Ndufb9
LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9.
   
 0.931
LOC107558431
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial-like.
   
 0.912
LOC107597916
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial-like.
   
 0.912
ND4
NADH-ubiquinone oxidoreductase chain 4.
    
 0.911
ndufb6
NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 6.
   
 0.905
ND1
NADH-ubiquinone oxidoreductase chain 1.
    
 0.904
ND3
NADH-ubiquinone oxidoreductase chain 3.
    
 0.899
LOC107554621
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial-like.
   
 0.896
LOC107560095
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial-like.
   
 0.896
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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