STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107558576Protein FAM133-like. (188 aa)    
Predicted Functional Partners:
ENSSGRP00000083203
annotation not available
      
 0.596
ENSSGRP00000111694
THO complex 6.
      
 0.569
thoc7
THO complex subunit 7 homolog.
      
 0.523
LOC107551027
THO complex subunit 7 homolog.
      
 0.523
ENSSGRP00000032177
Caspase recruitment domain family, member 14.
      
 0.518
LOC107582683
Coiled-coil domain-containing protein 174-like.
   
    0.514
LOC107585200
Coiled-coil domain-containing protein 174-like.
   
    0.514
ENSSGRP00000032514
Rab3 GTPase-activating protein non-catalytic subunit-like isoform X1.
      
 0.491
LOC107582873
Rab3 GTPase-activating protein non-catalytic subunit-like isoform X1.
      
 0.491
ENSSGRP00000000989
THO complex 3.
      
 0.485
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.