STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP000000024622',3'-cyclic nucleotide 3' phosphodiesterase. (443 aa)    
Predicted Functional Partners:
LOC107573602
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like.
   
   0.862
LOC107594238
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like.
   
   0.862
Ndufb9
LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9.
    
   0.787
ND4
NADH-ubiquinone oxidoreductase chain 4.
    
 
 0.768
ND1
NADH-ubiquinone oxidoreductase chain 1.
    
 
 0.757
ND3
NADH-ubiquinone oxidoreductase chain 3.
    
   0.739
ND4L
NADH-ubiquinone oxidoreductase chain 4L.
    
 
 0.730
ENSSGRP00000001975
annotation not available
   
   0.709
ENSSGRP00000021459
annotation not available
   
   0.709
ENSSGRP00000027374
NADH:ubiquinone oxidoreductase subunit S6.
   
   0.706
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.