STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000002525Magnesium-dependent phosphatase 1-like. (134 aa)    
Predicted Functional Partners:
LOC107591619
Programmed cell death 6-interacting protein-like isoform X1.
    
 0.927
LOC107593555
Programmed cell death 6-interacting protein-like isoform X1.
    
 0.927
ENSSGRP00000011152
Tyrosine-protein phosphatase non-receptor type 23-like.
    
 0.917
LOC107602386
Tyrosine-protein phosphatase non-receptor type 23-like isoform X1.
    
 0.917
Ptpn23
Tyrosine-protein phosphatase non-receptor type 23 isoform X1.
    
 0.917
LOC107591994
Tyrosine-protein phosphatase non-receptor type 23-like.
    
 0.917
ENSSGRP00000013444
IST1 factor associated with ESCRT-III.
     
 0.688
ENSSGRP00000033272
Vacuolar protein sorting-associated protein IST1.
     
 0.688
LOC107552765
Charged multivesicular body protein 2A.
     
 0.684
LOC107582752
Charged multivesicular body protein 2a-like.
     
 0.684
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.