STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000002565Latent transforming growth factor beta binding protein 1. (1481 aa)    
Predicted Functional Partners:
ENSSGRP00000037912
Transforming growth factor beta-1-like.
   
 0.765
LOC107573058
Transforming growth factor beta-1.
   
 0.765
LOC107598564
Transforming growth factor beta-1-like.
   
 0.765
LOC107589304
Transforming growth factor beta-1-like.
   
 0.765
LOC107564862
Integrin beta-6-like.
    
 0.730
ENSSGRP00000089846
Transforming growth factor beta-3-like.
   
 0.728
tgfb3
Transforming growth factor beta-3.
   
 0.728
tgfb2
Transforming growth factor beta-2.
   
 0.647
ENSSGRP00000040243
Transforming growth factor beta-2-like.
   
 0.647
LOC107598937
Transforming growth factor beta-2-like.
   
 0.647
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.