STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000002674annotation not available (76 aa)    
Predicted Functional Partners:
Trip12
E3 ubiquitin-protein ligase TRIP12.
   
 
 0.738
ENSSGRP00000084766
E3 ubiquitin-protein ligase TRIP12-like.
   
 
 0.738
LOC107548991
Ubiquitin-conjugating enzyme E2 L3-like.
   
 0.597
LOC107599129
Ubiquitin-conjugating enzyme E2 L3.
   
 0.597
LOC107602229
Ubiquitin-conjugating enzyme E2 L3-like.
   
 0.597
ENSSGRP00000038274
annotation not available
   
 
 0.545
LOC107561562
Interferon-induced helicase C domain-containing protein 1-like.
   
 
 0.509
LOC107563828
Interferon-induced helicase C domain-containing protein 1-like.
   
 
 0.509
ATG7
Autophagy related 7.
   
 0.481
Atg7
Ubiquitin-like modifier-activating enzyme ATG7.
   
 0.481
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.