ENSSGRP00000002876 protein (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSGRP00000002876

annotation not available (197 aa)

Predicted Functional Partners:

Gart

0.491

ENSSGRP00000077534

0.460

ENSSGRP00000091078

0.460

ENSSGRP00000079597

0.400

ENSSGRP00000091420

0.400

ENSSGRP00000091421

0.400

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000002876	ENSSGRP00000077534	ENSSGRP00000002876	ENSSGRP00000077534	annotation not available	Brevican.	0.460
ENSSGRP00000002876	ENSSGRP00000079597	ENSSGRP00000002876	ENSSGRP00000079597	annotation not available	GDP-fucose protein O-fucosyltransferase 2-like isoform X1.	0.400
ENSSGRP00000002876	ENSSGRP00000091078	ENSSGRP00000002876	ENSSGRP00000091078	annotation not available	Brevican core protein-like isoform X1.	0.460
ENSSGRP00000002876	ENSSGRP00000091420	ENSSGRP00000002876	ENSSGRP00000091420	annotation not available	GDP-fucose protein O-fucosyltransferase 2-like.	0.400
ENSSGRP00000002876	ENSSGRP00000091421	ENSSGRP00000002876	ENSSGRP00000091421	annotation not available	annotation not available	0.400
ENSSGRP00000002876	Gart	ENSSGRP00000002876	ENSSGRP00000059188	annotation not available	Trifunctional purine biosynthetic protein adenosine-3.	0.491
ENSSGRP00000077534	ENSSGRP00000002876	ENSSGRP00000077534	ENSSGRP00000002876	Brevican.	annotation not available	0.460
ENSSGRP00000079597	ENSSGRP00000002876	ENSSGRP00000079597	ENSSGRP00000002876	GDP-fucose protein O-fucosyltransferase 2-like isoform X1.	annotation not available	0.400
ENSSGRP00000079597	ENSSGRP00000091420	ENSSGRP00000079597	ENSSGRP00000091420	GDP-fucose protein O-fucosyltransferase 2-like isoform X1.	GDP-fucose protein O-fucosyltransferase 2-like.	0.900
ENSSGRP00000091078	ENSSGRP00000002876	ENSSGRP00000091078	ENSSGRP00000002876	Brevican core protein-like isoform X1.	annotation not available	0.460
ENSSGRP00000091420	ENSSGRP00000002876	ENSSGRP00000091420	ENSSGRP00000002876	GDP-fucose protein O-fucosyltransferase 2-like.	annotation not available	0.400
ENSSGRP00000091420	ENSSGRP00000079597	ENSSGRP00000091420	ENSSGRP00000079597	GDP-fucose protein O-fucosyltransferase 2-like.	GDP-fucose protein O-fucosyltransferase 2-like isoform X1.	0.900
ENSSGRP00000091421	ENSSGRP00000002876	ENSSGRP00000091421	ENSSGRP00000002876	annotation not available	annotation not available	0.400
Gart	ENSSGRP00000002876	ENSSGRP00000059188	ENSSGRP00000002876	Trifunctional purine biosynthetic protein adenosine-3.	annotation not available	0.491