STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFMBT1Scm-like with four MBT domains protein 1. (869 aa)    
Predicted Functional Partners:
RING1
E3 ubiquitin-protein ligase RING2-A-like.
    
 0.611
LOC107567817
E3 ubiquitin-protein ligase RING2-A-like.
    
 0.611
LOC107564705
E3 ubiquitin-protein ligase RING2 isoform X1.
    
 0.611
LOC107589914
E3 ubiquitin-protein ligase RING2-like.
    
 0.611
LOC107582405
YY1-associated factor 2-like.
    
 0.594
LOC107568051
RING1 and YY1-binding protein A.
    
 0.594
ENSSGRP00000054861
RING1 and YY1 binding protein b.
    
 0.594
LOC107551502
RING1 and YY1-binding protein A-like.
    
 0.594
LOC107584476
RING1 and YY1-binding protein B-like.
    
 0.594
LOC107587149
YY1-associated factor 2-like.
    
 0.594
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.