ENSSGRP00000003085 protein (Sinocyclocheilus grahami)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

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[Homology]

Score

ENSSGRP00000003085

annotation not available (143 aa)

Predicted Functional Partners:

LOC107571369

0.827

commd6

0.809

LOC107560250

0.734

LOC107550711

0.734

LOC107550711-2

0.734

lrrc41

0.715

commd2

0.696

ENSSGRP00000005442

0.694

rbx1

0.694

ctnnb1

0.690

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000003085	ENSSGRP00000005442	ENSSGRP00000003085	ENSSGRP00000005442	annotation not available	RING-box protein 1.	0.694
ENSSGRP00000003085	LOC107550711	ENSSGRP00000003085	ENSSGRP00000075730	annotation not available	Transcription elongation factor B polypeptide 1.	0.734
ENSSGRP00000003085	LOC107550711-2	ENSSGRP00000003085	ENSSGRP00000107078	annotation not available	Transcription elongation factor B polypeptide 1.	0.734
ENSSGRP00000003085	LOC107560250	ENSSGRP00000003085	ENSSGRP00000021612	annotation not available	Transcription elongation factor B polypeptide 1-like.	0.734
ENSSGRP00000003085	LOC107571369	ENSSGRP00000003085	ENSSGRP00000031318	annotation not available	COMM domain-containing protein 5-like.	0.827
ENSSGRP00000003085	commd2	ENSSGRP00000003085	ENSSGRP00000013770	annotation not available	COMM domain-containing protein 2 isoform X1.	0.696
ENSSGRP00000003085	commd6	ENSSGRP00000003085	ENSSGRP00000103569	annotation not available	COMM domain-containing protein 6.	0.809
ENSSGRP00000003085	ctnnb1	ENSSGRP00000003085	ENSSGRP00000010620	annotation not available	Catenin beta 1.	0.690
ENSSGRP00000003085	lrrc41	ENSSGRP00000003085	ENSSGRP00000061995	annotation not available	Leucine-rich repeat-containing protein 41 isoform X1.	0.715
ENSSGRP00000003085	rbx1	ENSSGRP00000003085	ENSSGRP00000109008	annotation not available	E3 ubiquitin-protein ligase RBX1.	0.694
ENSSGRP00000005442	ENSSGRP00000003085	ENSSGRP00000005442	ENSSGRP00000003085	RING-box protein 1.	annotation not available	0.694
ENSSGRP00000005442	LOC107550711	ENSSGRP00000005442	ENSSGRP00000075730	RING-box protein 1.	Transcription elongation factor B polypeptide 1.	0.987
ENSSGRP00000005442	LOC107550711-2	ENSSGRP00000005442	ENSSGRP00000107078	RING-box protein 1.	Transcription elongation factor B polypeptide 1.	0.990
ENSSGRP00000005442	LOC107560250	ENSSGRP00000005442	ENSSGRP00000021612	RING-box protein 1.	Transcription elongation factor B polypeptide 1-like.	0.987
ENSSGRP00000005442	LOC107571369	ENSSGRP00000005442	ENSSGRP00000031318	RING-box protein 1.	COMM domain-containing protein 5-like.	0.724
ENSSGRP00000005442	commd2	ENSSGRP00000005442	ENSSGRP00000013770	RING-box protein 1.	COMM domain-containing protein 2 isoform X1.	0.661
ENSSGRP00000005442	commd6	ENSSGRP00000005442	ENSSGRP00000103569	RING-box protein 1.	COMM domain-containing protein 6.	0.665
ENSSGRP00000005442	ctnnb1	ENSSGRP00000005442	ENSSGRP00000010620	RING-box protein 1.	Catenin beta 1.	0.651
ENSSGRP00000005442	lrrc41	ENSSGRP00000005442	ENSSGRP00000061995	RING-box protein 1.	Leucine-rich repeat-containing protein 41 isoform X1.	0.724
LOC107550711	ENSSGRP00000003085	ENSSGRP00000075730	ENSSGRP00000003085	Transcription elongation factor B polypeptide 1.	annotation not available	0.734