STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000003121annotation not available (983 aa)    
Predicted Functional Partners:
LOC107597449
SLAIN motif-containing protein 2-like isoform X1.
    
 
 0.980
LOC107569179
Kinetochore protein NDC80 homolog.
    
 
 0.943
LOC107560547
Kinetochore protein NDC80 homolog.
    
 
 0.943
ENSSGRP00000035016
Kinetochore protein Nuf2-like.
   
 
 0.911
ENSSGRP00000080343
UF2 component of NDC80 kinetochore complex.
   
 
 0.911
LOC107602947
Transforming acidic coiled-coil-containing protein 3-like isoform X1.
    
 
 0.910
LOC107553197
Transforming acidic coiled-coil-containing protein 3-like isoform X1.
    
 
 0.910
ENSSGRP00000084943
Transforming acidic coiled-coil-containing protein 2.
    
 
 0.897
mad2l1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.891
ENSSGRP00000043737
annotation not available
   
 0.891
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.