STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000003181POU class 2 homeobox 2a. (455 aa)    
Predicted Functional Partners:
SP1
Transcription factor Sp1-like isoform X1.
    
 0.601
ENSSGRP00000035477
Transcription factor Sp1-like.
    
 0.601
snapc3
SnRNA-activating protein complex subunit 3.
   
 
  0.597
ENSSGRP00000016894
annotation not available
    
 
 0.586
ENSSGRP00000084292
annotation not available
    
 
 0.586
ENSSGRP00000036854
Small nuclear RNA activating complex, polypeptide 4.
    
  0.574
LOC107555491
SnRNA-activating protein complex subunit 4-like isoform X1.
    
  0.574
ENSSGRP00000009426
Transcription initiation factor TFIIB.
    
 0.544
LOC107589845
Transcription initiation factor IIB-like.
    
 0.544
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
     
 0.522
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.