STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000003202Tetratricopeptide repeat protein 8-like. (80 aa)    
Predicted Functional Partners:
ENSSGRP00000003997
Bardet-Biedl syndrome 1 protein-like.
   
 0.999
bbs2
Bardet-Biedl syndrome 2 protein.
  
 0.998
bbs7
Bardet-Biedl syndrome 7 protein.
   
 0.996
ENSSGRP00000035245
Bardet-Biedl syndrome 9.
    
 0.988
ENSSGRP00000087436
Bardet-Biedl syndrome 9.
    
 0.988
Bbs4
Bardet-Biedl syndrome 4 protein.
  
 0.981
ENSSGRP00000076187
Bardet-Biedl syndrome 4 protein-like.
  
 0.981
ENSSGRP00000046665
Bardet-Biedl syndrome 4.
   
 0.977
ENSSGRP00000005577
annotation not available
   
 0.933
Lztfl1
Leucine zipper transcription factor-like protein 1 isoform X1.
   
 0.933
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.