STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107582040Prenylated Rab acceptor protein 1-like. (190 aa)    
Predicted Functional Partners:
ENSSGRP00000006598
annotation not available
   
 
 0.720
LOC107566288
Protein transport protein YIF1.
   
 
 0.720
yif1a
Protein transport protein YIF1.
   
 
 0.720
ENSSGRP00000071727
Yip1 interacting factor homolog A (S. cerevisiae).
   
 
 0.720
ENSSGRP00000093777
Protein transport protein YIF1.
   
 
 0.720
ENSSGRP00000093778
annotation not available
   
 
 0.720
ENSSGRP00000029753
Piccolo presynaptic cytomatrix protein b.
    
 
 0.646
LOC107598169
Armadillo repeat-containing protein 8.
    
 
 0.631
ENSSGRP00000112485
Armadillo repeat containing 8.
    
 
 0.631
ENSSGRP00000020841
Coatomer subunit epsilon-like.
   
  
 0.623
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.