STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107558795Receptor expression-enhancing protein 6-like. (172 aa)    
Predicted Functional Partners:
LOC107593806
Phosphoribosylformylglycinamidine synthase-like isoform X1.
      
 0.517
LOC107556148
Phosphoribosylformylglycinamidine synthase-like.
      
 0.517
ENSSGRP00000068775
annotation not available
      
 0.482
mlh1
DNA mismatch repair protein MLH1.
     
 0.470
ENSSGRP00000068555
Receptor accessory protein 5.
  
 
 
0.455
LOC107556177
Receptor expression-enhancing protein 6-like.
  
 
 
0.422
reep6
Receptor expression-enhancing protein 5/6.
  
 
 
0.422
LOC107591448
Receptor expression-enhancing protein 6-like.
  
 
 
0.412
ENSSGRP00000005955
annotation not available
  
 
 
0.408
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.