Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000003263annotation not available (147 aa)    
Predicted Functional Partners:
ENSSGRP00000034836
RING finger protein 223-like.
   
 0.945
ENSSGRP00000072297
Discs, large (Drosophila) homolog-associated protein 3.
   
 0.896
ENSSGRP00000029064
Leucine zipper, putative tumor suppressor family member 3b.
     
 0.861
ENSSGRP00000036375
Leucine zipper, putative tumor suppressor family member 3b.
     
 0.861
HOMER1
Homer protein homolog 1-like.
    
 0.847
ENSSGRP00000034544
Homer scaffold protein 1b.
    
 0.847
LOC107570957
Homer protein homolog 1-like.
    
 0.847
LOC107555494
Homer protein homolog 1-like.
    
 0.847
ENSSGRP00000015954
annotation not available
   
 0.836
ENSSGRP00000022999
Discs, large (Drosophila) homolog-associated protein 2a.
   
 0.836
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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