STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107600300FYVE, RhoGEF and PH domain-containing protein 5-like isoform X1. (1506 aa)    
Predicted Functional Partners:
ENSSGRP00000042469
Serine/threonine-protein kinase Kist-like.
      
 0.649
uhmk1
Serine/threonine-protein kinase Kist.
      
 0.649
ENSSGRP00000040032
Coiled-coil domain containing 28A.
      
 0.618
ENSSGRP00000083886
annotation not available
      
 0.618
ENSSGRP00000016551
Pre-B-cell leukemia transcription factor 1 isoform X1.
      
 0.614
LOC107592879
FYN-binding protein-like.
      
 0.607
ENSSGRP00000041680
Sushi-repeat containing protein X-linked 2.
      
 0.601
ENSSGRP00000081758
Serine/threonine-protein kinase SBK1-like.
      
 0.601
LOC107551352
Calcium uniporter protein, mitochondrial-like.
   
 
 0.599
LOC107564525
Calcium uniporter protein, mitochondrial.
   
 
 0.599
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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