STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000003296HtrA serine peptidase 1b. (431 aa)    
Predicted Functional Partners:
ENSSGRP00000109741
Sterol carrier protein 2a.
    
 0.933
ENSSGRP00000111100
Sterol carrier protein 2b.
    
 0.933
katnal2
Katanin p60 ATPase-containing subunit A-like 2.
   
 0.797
ENSSGRP00000057681
LOW QUALITY PROTEIN: katanin p60 ATPase-containing subunit A-like 2.
   
 0.797
ENSSGRP00000000760
Baculoviral IAP repeat-containing protein 6 (apollon).
    
 0.778
LOC107583536
Baculoviral IAP repeat-containing protein 6-like isoform X1.
    
 0.778
ENSSGRP00000035319
26S proteasome non-ATPase regulatory subunit 1 isoform X1.
    
 0.767
ENSSGRP00000098300
26S proteasome non-ATPase regulatory subunit 1-like.
    
 0.767
ENSSGRP00000011941
26S protease regulatory subunit 6B-like.
    
 0.726
LOC107582103
26S protease regulatory subunit 10B-like.
    
 0.726
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.