STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDSS1Decaprenyl-diphosphate synthase subunit 1-like. (348 aa)    
Predicted Functional Partners:
ENSSGRP00000065103
Prenyl (decaprenyl) diphosphate synthase, subunit 2.
  
  
 0.891
mvd
Diphosphomevalonate decarboxylase isoform X1.
  
 0.890
ENSSGRP00000067988
Decaprenyl-diphosphate synthase subunit 2-like.
  
  
 0.890
LOC107588045
Isopentenyl-diphosphate Delta-isomerase 1-like.
  
 
 0.804
LOC107600144
Isopentenyl-diphosphate Delta-isomerase 1-like isoform X1.
  
 
 0.804
LOC107587489
4-hydroxybenzoate polyprenyltransferase, mitochondrial-like.
  
 
 0.801
LOC107567138
4-hydroxybenzoate polyprenyltransferase, mitochondrial-like.
  
 
 0.801
ENSSGRP00000042886
Lanosterol synthase-like.
  
 
 0.770
ENSSGRP00000006069
annotation not available
  
 0.731
fdft1
Farnesyl-diphosphate farnesyltransferase.
  
 0.731
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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