STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Whsc1l1[histone H3]-lysine36 N-dimethyltransferase NSD3. (378 aa)    
Predicted Functional Partners:
Rbbp5
Retinoblastoma-binding protein 5.
    
 0.718
setd7
Histone-lysine N-methyltransferase SETD7.
   
 0.709
mre11
Double-strand break repair protein MRE11A isoform X1.
   
 0.698
eed
Polycomb protein EED.
   
 0.696
ENSSGRP00000018095
Polycomb protein eed-like.
   
 0.696
ash2l
Set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
    
 0.685
ENSSGRP00000052694
Set1/Ash2 histone methyltransferase complex subunit ASH2-like.
    
 0.685
ENSSGRP00000059199
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1-like.
    
 0.681
plod2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform X1.
    
 0.681
LOC107602502
Calmodulin-lysine N-methyltransferase-like isoform X1.
     
 0.675
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.