STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000003364annotation not available (566 aa)    
Predicted Functional Partners:
ENSSGRP00000047289
Tumor necrosis factor receptor superfamily member 16-like.
    
 0.673
ENSSGRP00000009129
Histone deacetylase 3.
    
 0.588
HDAC3
Histone deacetylase 3.
    
 0.588
ENSSGRP00000019036
Probable histone deacetylase 1-B.
    
 0.584
LOC107584281
Probable histone deacetylase 1-B isoform X1.
    
 0.584
LOC107562876
Probable histone deacetylase 1-B.
    
 0.584
hdac8
Histone deacetylase 8 isoform X1.
    
 0.584
ENSSGRP00000109945
annotation not available
    
 0.584
Rpp38
Ribonucleases P/MRP protein subunit RPP38.
    
 0.580
LOC107570677
Transmembrane protein 263-like.
      
 0.568
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.