STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000003372annotation not available (222 aa)    
Predicted Functional Partners:
Mrpl21
39S ribosomal protein L21, mitochondrial.
  
 
 0.986
LOC107595760
39S ribosomal protein L17, mitochondrial-like.
   
   0.909
ENSSGRP00000100478
Mitochondrial ribosomal protein L17.
   
   0.909
ENSSGRP00000006447
annotation not available
  
 
 0.908
mrps16
28S ribosomal protein S16, mitochondrial.
  
 
 0.908
RPS15
Ribosomal protein S15.
   
 
 0.907
rps15
Small subunit ribosomal protein S15e.
   
 
 0.907
LOC107575615
28S ribosomal protein S6, mitochondrial-like.
   
   0.907
ENSSGRP00000041111
Mitochondrial ribosomal protein S6.
   
   0.907
LOC107559921
28S ribosomal protein S9, mitochondrial-like.
  
   0.906
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.