STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000003380annotation not available (519 aa)    
Predicted Functional Partners:
LOC107582035
Protein capicua homolog isoform X1.
    
 
 0.762
LOC107554354
Protein capicua homolog isoform X1.
    
 
 0.762
LOC107551694
Protein capicua homolog isoform X1.
    
 
 0.762
ENSSGRP00000104407
Capicua transcriptional repressor.
    
 
 0.762
ENSSGRP00000103657
annotation not available
      
 0.626
ENSSGRP00000106492
Coilin-like.
    
 
 0.540
LOC107596141
Serine/arginine-rich splicing factor 7-like isoform X1.
      
 0.513
ENSSGRP00000086811
Ataxin 2.
   
 
 0.496
LOC107552590
Ataxin-2-like.
   
 
 0.496
ENSSGRP00000010129
HMG box transcription factor BBX-like.
    
 
 0.480
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.