STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000003485Calcium binding protein 4. (239 aa)    
Predicted Functional Partners:
ENSSGRP00000059550
Calcium/calmodulin-dependent serine protein kinase.
    
 0.700
ENSSGRP00000064648
Calcium/calmodulin-dependent serine protein kinase b.
    
 0.700
ENSSGRP00000096002
Peripheral plasma membrane protein CASK-like.
    
 0.700
LOC107565944
Calcium/calmodulin-dependent serine protein kinase.
    
 0.700
ENSSGRP00000011528
WD repeat domain 90.
   
 0.621
ENSSGRP00000028211
Calcium channel, voltage-dependent, L type, alpha 1F subunit.
   
 
 0.608
ENSSGRP00000057599
Calcium channel, voltage-dependent, L type, alpha 1F subunit.
   
 
 0.608
xpc
DNA repair protein complementing XP-C cells isoform X1.
    
 0.533
ENSSGRP00000060121
annotation not available
    
 0.533
ENSSGRP00000068382
Metabotropic glutamate receptor 6-like.
    
 
 0.524
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.