STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107548867Protein cornichon homolog 2. (160 aa)    
Predicted Functional Partners:
ENSSGRP00000033000
Glutamate receptor 2 isoform X1.
    
 0.806
ENSSGRP00000041609
Glutamate receptor 2-like isoform X1.
    
 0.806
GRIA2
Glutamate receptor 2.
    
 0.806
LOC107591557
Glutamate receptor 2-like.
    
 0.806
tmed2
Transmembrane emp24 domain-containing protein 2 isoform X1.
    
 0.748
LOC107550417
Transmembrane emp24 domain-containing protein 10-like.
   
 0.712
LOC107593259
Transmembrane protein Tmp21-like.
   
 0.712
ENSSGRP00000013684
Glutamate receptor, ionotropic, AMPA 3b.
   
 0.693
LOC107597231
Glutamate receptor 3-like isoform X1.
   
 0.693
ENSSGRP00000043955
annotation not available
   
 0.693
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.