Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NKX2-8NK2 homeobox 8. (142 aa)    
Predicted Functional Partners:
ENSSGRP00000002710
NK2 homeobox 2b.
   
    0.491
LOC107548416
Homeobox protein Nkx-2.2a-like.
   
    0.491
Nkx2-2
Homeobox protein Nkx-2.2.
   
    0.491
ENSSGRP00000088042
Homeobox protein Nkx-2.2a.
   
    0.491
ENSSGRP00000076689
Helicase with zinc finger.
      
 0.447
helz
Probable helicase with zinc finger domain isoform X1.
      
 0.447
ENSSGRP00000097918
annotation not available
      
 0.447
LOC107592953
T-box transcription factor TBX20.
    
 0.434
LOC107600539
T-box transcription factor TBX20-like.
    
 0.434
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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