STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107571754Pseudouridine-5'-phosphatase-like isoform X1. (227 aa)    
Predicted Functional Partners:
LOC107551409
Protein-glucosylgalactosylhydroxylysine glucosidase.
  
 
 0.974
ENSSGRP00000099450
Protein-glucosylgalactosylhydroxylysine glucosidase.
  
 
 0.974
LOC107585700
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
    
 0.968
LOC107589852
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
    
 0.968
ENSSGRP00000045124
Mannose phosphate isomerase.
   
 0.967
LOC107596161
Protein YIPF6-like.
    
 0.949
LOC107596694
Protein YIPF6.
    
 0.949
ENSSGRP00000001410
Galactose-1-phosphate uridylyltransferase-like.
    
 0.948
adhfe1
Alcohol dehydrogenase iron containing 1.
    
 0.918
ENSSGRP00000053250
Alcohol dehydrogenase iron containing 1.
    
 0.918
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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