STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107603076Plasma membrane calcium-transporting ATPase 3-like isoform X1. (1300 aa)    
Predicted Functional Partners:
LOC107600310
CAMP-dependent protein kinase catalytic subunit beta isoform X1.
   
 
 0.710
LOC107599301
CAMP-dependent protein kinase catalytic subunit alpha-like.
   
 
 0.710
LOC107602709
CAMP-dependent protein kinase catalytic subunit alpha isoform X1.
   
 
 0.710
ENSSGRP00000077225
CAMP-dependent protein kinase catalytic subunit alpha-like.
   
 
 0.710
LOC107562862
CAMP-dependent protein kinase catalytic subunit beta isoform X1.
   
 
 0.710
LOC107592581
CAMP-dependent protein kinase catalytic subunit alpha-like.
   
 
 0.710
LOC107577258
Cardiac phospholamban-like.
    
 0.632
ENSSGRP00000060674
Si:ch211-270g19.5.
    
 0.632
PLN
Cardiac phospholamban-like.
    
 0.632
ENSSGRP00000071166
Si:ch211-270g19.5.
    
 0.632
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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