STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000003873annotation not available (93 aa)    
Predicted Functional Partners:
LOC107562394
NAD-dependent protein deacetylase sirtuin-1-like.
    
 0.899
LOC107565065
NAD-dependent protein deacetylase sirtuin-1-like isoform X1.
    
 0.899
ENSSGRP00000104985
annotation not available
    
 0.899
RPS23
Ribosomal protein S23.
   
 
 0.852
LOC107557416
40S ribosomal protein S23.
   
 
 0.852
LOC107557416-2
Small subunit ribosomal protein S23e.
   
 
 0.852
imp3
U3 small nucleolar ribonucleoprotein protein IMP3.
   
   0.852
ENSSGRP00000013069
UTP3 small subunit processome component.
   
   0.849
ENSSGRP00000006676
Small subunit ribosomal protein S19e.
    
 
 0.847
RPS19
Small subunit ribosomal protein S19e.
    
 
 0.847
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.