STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000003929Elongation factor Tu GTP-binding domain-containing protein 1-like. (689 aa)    
Predicted Functional Partners:
FAU
Small subunit ribosomal protein S30e.
   
 0.979
ENSSGRP00000003561
FAU ubiquitin like and ribosomal protein S30 fusion b.
   
 0.979
LOC107567395
Small subunit ribosomal protein S30e.
   
 0.979
LOC107555153
Small subunit ribosomal protein S30e.
   
 0.979
LOC107599340
39S ribosomal protein L12, mitochondrial-like.
  
 
 0.977
Mrpl21
39S ribosomal protein L21, mitochondrial.
   
 
 0.975
ENSSGRP00000036176
SBDS ribosome maturation factor.
  
 
 0.957
LOC107598575
Ribosome maturation protein SBDS.
  
 
 0.957
ENSSGRP00000006575
annotation not available
  
 0.946
LOC107567812
40S ribosomal protein S18-like.
  
 0.946
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.