STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000003957Glypican-6-like. (591 aa)    
Predicted Functional Partners:
SDC3
Syndecan-3-like.
     
 0.649
SDC3-2
Syndecan-3-like.
     
 0.649
LOC107586005
Glucuronyl/N-acetylglucosaminyl transferase EXT2.
     
 0.601
LOC107593432
Glucuronyl/N-acetylglucosaminyl transferase EXT2.
     
 0.601
LOC107598313
Xylosylprotein 4-beta-galactosyltransferase.
     
 0.600
LOC107563605
Xylosylprotein 4-beta-galactosyltransferase.
     
 0.600
ENSSGRP00000010445
annotation not available
    
 0.588
LOC107552099
Palmitoleoyl-protein carboxylesterase notum1a-like.
    
 0.588
notum
Palmitoleoyl-protein carboxylesterase NOTUM.
    
 0.588
LOC107584829
O-palmitoleoyl-L-serine hydrolase.
    
 0.588
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.