STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppwd1Peptidylprolyl isomerase domain and WD repeat-containing protein 1. (559 aa)    
Predicted Functional Partners:
ENSSGRP00000037470
annotation not available
   
 0.955
Ppil4
Peptidyl-prolyl cis-trans isomerase-like 4.
  
0.942
LOC107584443
Peptidyl-prolyl cis-trans isomerase-like 1.
  
0.924
ppil1
Peptidyl-prolyl cis-trans isomerase-like 1 isoform X1.
  
0.924
ENSSGRP00000054889
CWC22 spliceosome associated protein homolog.
   
  0.917
ENSSGRP00000074139
Pre-mRNA-splicing factor CWC22 homolog.
   
  0.917
cdc40
Cell division cycle 40.
   
 0.904
ENSSGRP00000013227
Cell division cycle 40 homolog (S. cerevisiae).
   
 0.904
syf2
Pre-mRNA-splicing factor SYF2.
    
 0.893
ENSSGRP00000091073
SYF2 pre-mRNA-splicing factor.
    
 0.893
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.