STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C6orf120UPF0669 protein C6orf120 homolog. (186 aa)    
Predicted Functional Partners:
LOC107599877
Transmembrane and ubiquitin-like domain-containing protein 1.
      
 0.621
LOC107557000
Transmembrane and ubiquitin-like domain-containing protein 1.
      
 0.621
LOC107593127
Membralin-like isoform X1.
      
 0.611
LOC107602804
Membralin-like isoform X1.
      
 0.611
rnf170
E3 ubiquitin-protein ligase RNF170 isoform X1.
      
 0.610
ENSSGRP00000015480
E3 ubiquitin-protein ligase RNF170-like.
      
 0.610
LOC107571926
Transmembrane and ubiquitin-like domain-containing protein 2.
      
 0.572
LOC107566939
Transmembrane and ubiquitin-like domain-containing protein 2.
      
 0.572
LOC107585891
Transmembrane and coiled-coil domain-containing protein 1.
      
 0.526
LOC107549116
Transmembrane and coiled-coil domain-containing protein 1.
      
 0.526
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.