ENSSGRP00000004086 protein (Sinocyclocheilus grahami)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSGRP00000004086

annotation not available (114 aa)

Predicted Functional Partners:

ENSSGRP00000019393

0.508

ENSSGRP00000019689

0.508

ENSSGRP00000057758

0.508

ENSSGRP00000060636

0.482

ENSSGRP00000025245

0.441

ENSSGRP00000090570

0.440

ENSSGRP00000060648

0.428

ENSSGRP00000020064

0.427

ENSSGRP00000022001

0.422

ENSSGRP00000002395

0.418

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSSGRP00000002395	ENSSGRP00000004086	annotation not available	annotation not available	0.418
ENSSGRP00000004086	ENSSGRP00000002395	annotation not available	annotation not available	0.418
ENSSGRP00000004086	ENSSGRP00000019393	annotation not available	annotation not available	0.508
ENSSGRP00000004086	ENSSGRP00000019689	annotation not available	annotation not available	0.508
ENSSGRP00000004086	ENSSGRP00000020064	annotation not available	annotation not available	0.427
ENSSGRP00000004086	ENSSGRP00000022001	annotation not available	annotation not available	0.422
ENSSGRP00000004086	ENSSGRP00000025245	annotation not available	annotation not available	0.441
ENSSGRP00000004086	ENSSGRP00000057758	annotation not available	annotation not available	0.508
ENSSGRP00000004086	ENSSGRP00000060636	annotation not available	annotation not available	0.482
ENSSGRP00000004086	ENSSGRP00000060648	annotation not available	annotation not available	0.428
ENSSGRP00000004086	ENSSGRP00000090570	annotation not available	annotation not available	0.440
ENSSGRP00000019393	ENSSGRP00000004086	annotation not available	annotation not available	0.508
ENSSGRP00000019689	ENSSGRP00000004086	annotation not available	annotation not available	0.508
ENSSGRP00000020064	ENSSGRP00000004086	annotation not available	annotation not available	0.427
ENSSGRP00000022001	ENSSGRP00000004086	annotation not available	annotation not available	0.422
ENSSGRP00000025245	ENSSGRP00000004086	annotation not available	annotation not available	0.441
ENSSGRP00000057758	ENSSGRP00000004086	annotation not available	annotation not available	0.508
ENSSGRP00000060636	ENSSGRP00000004086	annotation not available	annotation not available	0.482
ENSSGRP00000060648	ENSSGRP00000004086	annotation not available	annotation not available	0.428
ENSSGRP00000090570	ENSSGRP00000004086	annotation not available	annotation not available	0.440