Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000004100annotation not available (251 aa)    
Predicted Functional Partners:
ENSSGRP00000019939
annotation not available
     
  0.876
LOC107550032
GTP cyclohydrolase 1-like.
     
  0.818
LOC107595135
Thiamin pyrophosphokinase 1-like.
     
  0.818
LOC107583460
GTP cyclohydrolase 1-like isoform X1.
     
  0.818
LOC107564951
GTP cyclohydrolase 1-like.
     
  0.818
ENSSGRP00000086435
annotation not available
     
  0.818
ENSSGRP00000090208
Thiamin pyrophosphokinase 1-like.
     
  0.818
pts
6-pyruvoyltetrahydropterin synthase.
     
  0.805
ENSSGRP00000081610
annotation not available
     
  0.805
ENSSGRP00000033488
Alkaline phosphatase-like isoform X1.
     
  0.683
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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