STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000004108Apolipoprotein L4-like. (401 aa)    
Predicted Functional Partners:
LOC107561453
Haptoglobin-like.
     
 0.737
LOC107582169
Apolipoprotein A-I-like isoform X1.
    
 0.581
LOC107582086
Apolipoprotein A-I-like.
    
 0.581
ENSSGRP00000015803
Apolipoprotein A-I-like.
    
 0.581
LOC107596479
Apolipoprotein A-I-like.
    
 0.581
ENSSGRP00000079108
Apolipoprotein Eb-like.
    
 0.581
LOC107595112
Apolipoprotein A-I-like.
    
 0.581
LOC107595122
Apolipoprotein A-I-like.
    
 0.581
Fam20c
Extracellular serine/threonine protein kinase FAM20C.
    
  0.556
ENSSGRP00000002641
annotation not available
    
 0.540
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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