STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000004151annotation not available (235 aa)    
Predicted Functional Partners:
ENSSGRP00000041033
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.937
leo1
RNA polymerase-associated protein LEO1.
   
 
 0.937
ENSSGRP00000066673
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.
   
 
 0.880
ENSSGRP00000054041
LOW QUALITY PROTEIN: cell division cycle 5-like protein.
   
 
 0.862
ENSSGRP00000112821
Cell division cycle 5-like protein.
   
 
 0.862
SF3B2
Splicing factor 3b subunit 2.
   
 
 0.826
ENSSGRP00000025646
Splicing factor 3b, subunit 2.
   
 
 0.826
ENSSGRP00000017116
Small nuclear ribonucleoprotein 35 (U11/U12).
    
 
 0.809
ENSSGRP00000056884
U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like.
    
 
 0.809
LOC107548330
U1 small nuclear ribonucleoprotein 70 kDa-like.
    
 
 0.809
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.