STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000004168annotation not available (132 aa)    
Predicted Functional Partners:
ENSSGRP00000051637
DEAH (Asp-Glu-Ala-His) box helicase 30.
    
 
 0.721
LOC107583681
SRA stem-loop-interacting RNA-binding protein, mitochondrial-like.
   
 0.721
LOC107588278
SRA stem-loop-interacting RNA-binding protein, mitochondrial-like.
   
 0.721
LOC107554282
Serine/arginine-rich splicing factor 1A.
   
 0.666
LOC107582602
Serine/arginine-rich splicing factor 1A-like.
   
 0.666
ENSSGRP00000109055
Serine/arginine-rich splicing factor 1B.
   
 0.666
LOC107599446
Heterogeneous nuclear ribonucleoprotein M-like isoform X1.
   
 0.664
ENSSGRP00000108454
Heterogeneous nuclear ribonucleoprotein M.
   
 0.664
LOC107581576
Serine/arginine-rich splicing factor 2-like.
   
 0.656
ENSSGRP00000040078
Mitochondrial genome maintenance exonuclease 1.
    
 
 0.656
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.